PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT26167
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family WRKY
Protein Properties Length: 933aa    MW: 106331 Da    PI: 7.5153
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT26167genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY26.81.1e-08903924122
               ---SS-EEEEEEE--TT-SS-E CS
      WRKY   1 ldDgynWrKYGqKevkgsefpr 22 
               ldDg++WrKYGqK++ ++++pr
  EMT26167 903 LDDGFSWRKYGQKDILDAKHPR 924
               59*******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd147983.92E-2711138No hitNo description
SuperFamilySSF525402.59E-59161438IPR027417P-loop containing nucleoside triphosphate hydrolase
Gene3DG3DSA:3.40.50.3001.9E-18181354IPR027417P-loop containing nucleoside triphosphate hydrolase
PfamPF009311.9E-57196465IPR002182NB-ARC
PRINTSPR003645.1E-13198213No hitNo description
PRINTSPR003645.1E-13274288No hitNo description
PRINTSPR003645.1E-13371385No hitNo description
SuperFamilySSF520588.33E-25502855IPR032675Leucine-rich repeat domain, L domain-like
Gene3DG3DSA:3.80.10.104.4E-17574851IPR032675Leucine-rich repeat domain, L domain-like
PROSITE profilePS508119.42898924IPR003657WRKY domain
SuperFamilySSF1182901.7E-6900924IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.6E-6901924IPR003657WRKY domain
SMARTSM007740.0031903933IPR003657WRKY domain
PfamPF031061.5E-5904924IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043531Molecular FunctionADP binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 933 aa     Download sequence    Send to blast
MEAAVVSVSR GAIGFVIAKL GDLLAGKYKL LKGAKGEIMF LKAELESMRA FLERMSEAEE  60
EPDKQSKLWA KEVCDLSYDI EDSVDEFIVL VECESDCEPH GFKGFIHRSM NLLTTMNIRH  120
RIAKEFRGLK SRVVEVSERR MRYKIDDVVS KQNKTTIDLR LLALYADTAG LVGIDGPKNE  180
LIRLMAGEEG GSAQPTKVLS IVGFGGLGKT TLANQIYQKL KWQFQCQAFV SVSQKPSIRI  240
VLRRMLSQVG YVAREGADME IWAEDELISE LRKFLMDKRY FIVIDDIWDE TTWNVIRCAL  300
PENLYGSMII TTTRINSVAR ACCCNQHDYI YKMKTLSNED SRKLFFRRVF GSEDACPLYL  360
EEVSTQILKR CGGLPLAIVT ISSLLASERN KFKEHWVHIM NSLGPNFEVN PTLEGMRQIL  420
SLSYINLPHY LKTCMLYLGM YPEDYIIWKN DLVRQWVAQG FVSKAHGKYP EDVAEGYFNE  480
LVNRGIIQPV NTDHNNEVLS CRLHDMMLDL IIHKCRDENF ITAPDDIQDM IGLSDKVRRL  540
SLYLDGIIDG TILETTQLSQ VRALARFGNS AYAPPLLKFK HLRVLSLEFR WEIPDLTGIS  600
HLFQLRYLKI KTDGKIQVPS GVVHLGRLQH LIVPRRTILP NGIGNMKSLC TLQEFDVGLN  660
SIDNIRDLGD LINLRDLRIC GHLSKMDELH DMERRQRLDV LTRSLEKLCD LRYLHMDYNI  720
KVSYVLSSLF LRRLHMLCPF PKVPNAIGEL HNLFDLDLTI EVLEDDIAIL AQLQSLNRLK  780
LHIEGKPETE EKVVICRKGF PVLKHFWLFC VRMSQLTFEA GTMPSLEKLE VRINSPYGAA  840
PMGIEHLLGL KEIFVFVGGC GGEGSCSIRA ALTLLRKAID MRSSRPAANI KCVDNLLLPE  900
HLLDDGFSWR KYGQKDILDA KHPRLPKASS ELT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3qfl_A5e-19111231115MLA10
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703060.0HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004963275.10.0PREDICTED: putative disease resistance RPP13-like protein 3 isoform X1
RefseqXP_012700405.10.0PREDICTED: putative disease resistance RPP13-like protein 3 isoform X1
RefseqXP_014660443.10.0PREDICTED: putative disease resistance RPP13-like protein 3 isoform X1
TrEMBLM8CG650.0M8CG65_AEGTA; Disease resistance protein RPM1
STRINGSb08g022670.10.0(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP558
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G45260.12e-11Disease resistance protein (TIR-NBS-LRR class)